rs33275922 SNP Detail

Summary

• ID
  rs33275922
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12503070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTTCTTG GAGAAGATGT
  GGATGTGGGC TTTAAGACCC TCATCCTAGC TGCTTAGAAA CCAGATGTAG ACCTCTCAGC
  CTCTCCTGCA CCACGCCTGC CTGGACACTG CCATGTTCCT GCCTTGATGA TAATGGCCTG
  AACCTATGAA CCTATACCAG CCCTAATTAA ATGCAGTCCT TATAAACCCT GATTTGGTCA
  K
  GGTGTCTGAT CACAGCAGTA AATCCTGCTA AGACAACGCC CCTTTCTGAG TGTGCACAGG
  GAGTCAGCTG CACTGAGTAA AAGCTAGTTA CTTCGTGCGA ATGCAGTTTC TCACTTCTAT
  ATTCAAGTAC AGGAGCGATA TCCAGTGCTC AGACTCATGT ACTAGAGTTA GCCAGCAATC
  CAGCTCTGGT TTATTTTGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss46255654	mCV22520587	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T
ss148678607	ENSMUSSNP4055345	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33275922					SNP	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12503070 () rs orientation: forward

Symbol	Name	Function Class
Gm56835	predicted gene, 56835	within coordinates
Rr381713	regulatory region 381713	861 bp upstream