rs33280254 SNP Detail

Summary

• ID
  rs33280254
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:154579257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGGC TTTAAGAGTG TCTGCGTGGC
  R
  GTCTCTGATG GCCTTACCTC ACAAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45259799	mCV25182908	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148038400	ENSMUSSNP4061533	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss320570993	CHEV_2_154563073	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33280254					SNP	A	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:154579257 () rs orientation: forward

Symbol	Name	Function Class
Gm57835	predicted gene, 57835	within coordinates
Tssr26967	transcription start site region 26967	1147 bp downstream