rs33283243 SNP Detail

Summary

• ID
  rs33283243
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152609732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTGGCCTA GGAAAAGGAA
  CGTTAACCAG ATGGCCAGTC TAGTAAACCA GCGTACAGAG GGGTACCAAT AAAGAAGCCA
  AGTGGTATTT GGATGGCCAA TCAGGGGCTT AGTCCAGAGG GCTTCCCTGA GGAAGTGTTG
  TCCATTATGA CGGATGACCA GATGTAAGCT CAGTCAAAGA GGCTAGGTAG AGAGAGGCAG
  S
  GTAAAGGCCC CCTGGTGGTG AGGTCTATTA TATGTTTGGG ACATAGAGGC AGCCAGTAGG
  AACAGAAGAG ACAGAACAAG AAAGGCGGGA GCAGACAGTC CTCTGAGACC TACAGGTGCT
  GCTGCTTTTA CTGAGGAGGC GTGTTTGTAG GAAAGCATTC GAGGAGCGAT CCGAGGAGGT
  GTCAGGACTA GAGCACAGCG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45260111	mCV27575157	ABI	CRAMUS_MOUSE	f	SNP	G	C	G
ss147974134	ENSMUSSNP4980841	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33283243					SNP	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152609732 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12465	CpG island 12465	983 bp distal
Rr567460	regulatory region 567460	730 bp distal
Rr567461	regulatory region 567461	1124 bp distal
Rr567462	regulatory region 567462	within coordinates
Rr567463	regulatory region 567463	1794 bp proximal