rs33285124 SNP Detail

Summary

• ID
  rs33285124
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:163437102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTGAAGCT GGGCAGTGGT
  GGCACATGCC TTTGGTCTCA GCACTCAGGA GACCAAGGAT TTCTGTGAGT GAGTTCTAGG
  CCAGTCTGGT CTAGTCCCAT CCTGTGTCTT GCTGTCTACC TTCTCCCTCC CTCCAGGAAT
  CTTTTAGTTA TCAGAGCCAA GCAGTGTCCT TCTTGTAGGC AGTCACTGCC CACGCTGGCA
  Y
  GTGGGAAACT GCAAGTACAC TGTCCCTGAG GGTGGGCTGA CCTTGACAGA TGCAGGCACT
  TTCCAATGTC AGGCAGCAGC CCATTCCTCT CAGCCCTAGC TGTCCCAGCA TTGAACTCCC
  ATACTTAAGC TTTCCAAACA GCTCCTCTCT GCTTCTGTCC TCCCCAGGAG ATGGCTGCTC
  TCCCCTCCCT TCCCTCCTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss45260286	mCV23585541	ABI	CRAMUS_MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs33285124					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163437102 () rs orientation: forward

Symbol	Name	Function Class
Rr374198	regulatory region 374198	712 bp downstream
Rr569427	regulatory region 569427	826 bp distal
Rr569428	regulatory region 569428	within coordinates