rs33288736 SNP Detail

Summary

• ID
  rs33288736
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:40080908 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAT TTTACTTCAG CTACCAATTC
  R
  TATGTCGTGT CATAACTTTC TGCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46257248	mCV25306820	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss144620623	ENSMUSSNP7173973	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss322624613	CHEV_8_40713221	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33288736					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:40080908 () rs orientation: forward

Symbol	Name	Function Class
Msr1	macrophage scavenger receptor 1	within coordinates
Tssr81026	transcription start site region 81026	1378 bp downstream
Tssr81027	transcription start site region 81027	1481 bp downstream
Tssr81028	transcription start site region 81028	1531 bp downstream
Tssr81029	transcription start site region 81029	1650 bp downstream
Tssr81030	transcription start site region 81030	1772 bp downstream