rs33290518 SNP Detail

Summary

• ID
  rs33290518
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84326991 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAATGGTCAT GTGGGCCTTG GTGTTAAGTG CTCCAAGCAG
  GTCGTCACTG CTATTCGAGG GGCCATCGTC TGGGCCAAGC TTTCCATCGT TCCTGTACAG
  R
  CAGGCTACTG GGGGAACAAG ATTGGCAAGC CCCACACTGT TCCCTGCAAG GTGATAGGCC
  GCTGCGGTTC AGTGCTGGTG TGCCTTATCC CTGCCCCCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46257863	mCV25220895	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss145357748	ENSMUSSNP4127761	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss322745021	CHEV_8_86124261	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33290518					SNP	G	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84326991 () rs orientation: forward

Symbol	Name	Function Class
Gm18001	predicted gene, 18001	within coordinates
Gm42029	predicted gene, 42029	within coordinates
Rr178048	regulatory region 178048	1791 bp distal
Rr178049	regulatory region 178049	1610 bp proximal
Rr181860	regulatory region 181860	1591 bp distal
Rr185419	regulatory region 185419	1851 bp distal