rs33291846 SNP Detail

Summary

• ID
  rs33291846
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:88197756 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTAG CGGGTGGGTG CTGGCTCTGA
  M
  GTGGCTGGCC CGGGAGGGCG TAGCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss46258032	mCV24213066	ABI	CRAMUS_MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs33291846					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:88197756 () rs orientation: forward

Symbol	Name	Function Class
Cbln1	cerebellin 1 precursor protein	within coordinates
Cbln1os	cerebellin 1 precursor protein opposite strand	1684 bp upstream
Cpgi20770	CpG island 20770	1437 bp distal
Cpgi20771	CpG island 20771	within coordinates
Cpgi20772	CpG island 20772	467 bp proximal
Rr382427	regulatory region 382427	1853 bp downstream
Rr666962	regulatory region 666962	1248 bp proximal
Rr666963	regulatory region 666963	1373 bp proximal
Rr666964	regulatory region 666964	1826 bp proximal
Rr666965	regulatory region 666965	1912 bp proximal
Tssr2634	transcription start site region 2634	1398 bp downstream
Tssr78595	transcription start site region 78595	1643 bp upstream
Tssr78596	transcription start site region 78596	1655 bp upstream
Tssr78597	transcription start site region 78597	1677 bp upstream
Tssr78598	transcription start site region 78598	1710 bp upstream
Tssr78599	transcription start site region 78599	1738 bp upstream
Tssr78600	transcription start site region 78600	1761 bp upstream
Tssr78601	transcription start site region 78601	1768 bp upstream
Tssr82308	transcription start site region 82308	1206 bp upstream
Tssr82309	transcription start site region 82309	1019 bp upstream
Tssr82310	transcription start site region 82310	826 bp upstream
Tssr82311	transcription start site region 82311	667 bp upstream
Tssr82312	transcription start site region 82312	477 bp upstream
Tssr82313	transcription start site region 82313	451 bp upstream
Tssr82314	transcription start site region 82314	993 bp downstream
Tssr82315	transcription start site region 82315	1033 bp downstream
Tssr82316	transcription start site region 82316	1072 bp downstream
Tssr82317	transcription start site region 82317	1237 bp downstream
Tssr82318	transcription start site region 82318	1415 bp downstream
Tssr82319	transcription start site region 82319	1448 bp downstream
Tssr82320	transcription start site region 82320	1475 bp downstream
Tssr82321	transcription start site region 82321	1487 bp downstream