rs33292005 SNP Detail

Summary

• ID
  rs33292005
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:133207080 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGATGGGA ACTTGAAAGG
  CAGAAGGCGT TAGGTGCAAG GGGGAGTGTG CTGCTGTGAT ATATGACACC CAGCTCTCTG
  GGAGAATAGC AACCTGACTG GTGGGGTTTG CTAAGGACTC TGCTGTGGGA GCTTCTGCTG
  TGGTTTCTAG CTAATATCGC TGAACACGGG ATAAAGAAGA GGTGCATATG AGTCTCTAAT
  W
  TACCACTGAG TCAAATTGCT GAGCTTCCAG GCTCCTTCCC TAGGAAGCCA CGAATTGGAA
  GCAGCTAAGC ATCTCTACCA GTATCCATGA CTCTGTCCCC ACAACCACAG CTCTCCCCAT
  GAAAGACTTC CTTTGACTTC CAGGTATATC AGGCCTCCTG CTACTGCTGC TCCTGGGATC
  TGTACGCTTC CTTGTCAATT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47279917	NES11559664	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33292005					SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47279917	NES11559664	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:133207080 () rs orientation: forward

Symbol	Name	Function Class
Gm35625	predicted gene, 35625	within coordinates
Rr169523	regulatory region 169523	within coordinates
Rr169524	regulatory region 169524	1322 bp proximal