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rs33292337 SNP Detail
Summary
  • ID
    rs33292337
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr8:114363593 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          TGGGA TTTAAAGTGA TAACTCTGGG
    Y
    GGAAAACTGT GGGAACCGTG AAAAC                                      
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss46257884 mCV22950660 ABI CRAMUS_MOUSE f SNP T C C
ss145772029 ENSMUSSNP4823475 ENSEMBL ENSEMBL_Sanger f SNP T C C
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs33292337 SNP T C C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr8:114363593 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
4921521C08Rik RIKEN cDNA 4921521C08 gene 1181 bp upstream
Cpgi21080 CpG island 21080 691 bp distal
Mon1b MON1 homolog B, secretory traffciking associated within coordinates
Rr368624 regulatory region 368624 987 bp downstream
Rr401146 regulatory region 401146 1368 bp downstream
Rr670300 regulatory region 670300 1116 bp distal
Tssr79522 transcription start site region 79522 1364 bp downstream
Tssr79523 transcription start site region 79523 1331 bp downstream
Tssr79524 transcription start site region 79524 1119 bp downstream
Tssr79525 transcription start site region 79525 1099 bp downstream
Tssr79526 transcription start site region 79526 1767 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory