rs33295454 SNP Detail

Summary

• ID
  rs33295454
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110467723 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTCAAAGT AGCGCAGGGC
  ACGTGCAGGA CCCCGGTGCC GGGCCATGCC CGACAGTGCC CGGATGACGG CGCCTGCATG
  GCGAGCCTTC TGAGATTCAT TTCCACTTGA CTCTGAGTCC AGCCCCGGTG GGGGGCGCAG
  CAGGCGACGC AGCTCCAAGG GCCGTAGTGA CACTCGACCC AGAGCTTGCA GCAAGGCTAA
  M
  AGCTGCTCCT GGCAGCGGGC TCCCAGGGCT GTCCCCGTGT TAAGTGTCTC TAACAGGTAG
  CCCACCAGGC CTGCTTGCAC ACAGGTGGTG CGACTGGCAG GGCAGCTGTC ACAGAGCCAC
  CAGAGGCGTT GTGCCAGGAA GAGGCGCAGC TCAGCTGTGG GCAGTGCTGG TAGCCACTGC
  ATCAGCACCA GCACTGGCTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss47780493	NES11982448	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	A	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33295454					SNP	C	C	C	C	C	A	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47780493	NES11982448	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110467723 () rs orientation: forward

Symbol	Name	Function Class
Nbeal2	neurobeachin-like 2	within coordinates