rs33298736 SNP Detail

Summary

• ID
  rs33298736
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:24600788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAACCAGT TCTTGTAAAC
  TGTCCTTTGA TCTCAACTCA CTGTGGAGTG CTCAGGCATG GGTGTGTTTC TCGCACCCCC
  CCCCACACAC ACACACAAAT AAATAAATAA AATTACTATA TTTTAAAAAT AAAGAGTAGA
  AGGAGAGCTG GAGACATGGC TCAGTGGTAG GCTTTTTGTT TGTTTGTGTT TGTTTGTTTG
  W
  CAAACATGAA CCATAGATTC AATTCCTAGT ACCCTGGGTG GGAAAAAAAA CTGATCCATT
  CTTGGTAAAA TTAAAAAAGC AAAAACAAAA ACAGAAAAAC GTACCCCACA TTGATCCAGA
  GAGAATAATG AGTTGAAAGC ATAGAAGAGA CCAAAGTCTA ATTTTTCTCT TTTTCTCCTA
  GTAATTTATT TTTTATGTAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45762112	mCV25442793	ABI	CRAMUS_MOUSE	f	SNP		A	T
ss148093030	ENSMUSSNP4227618	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
ss321495666	CHEV_5_23901608	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33298736					SNP	A	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:24600788 () rs orientation: forward

Symbol	Name	Function Class
Abcb8	ATP-binding cassette, sub-family B member 8	within coordinates
Cpgi15597	CpG island 15597	1034 bp distal
Rr398999	regulatory region 398999	1320 bp downstream
Tssr45412	transcription start site region 45412	1360 bp downstream