rs33301736 SNP Detail

Summary

• ID
  rs33301736
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110566943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCTTCTCT GCCACCATCT
  GGAACTTCTC TCACATGCAC ACACACGCAC GCACGCACGC ACGCACGCAC ACACACATGC
  ACACACGCAC GCGCGCATAC ACACACACAC ATAGAGAAAC AGAGAGGCAG AGAGAATGAG
  AAAACTACTG AGAAAGGATC GGAATGCCCA TTTGGATGCT AATCAATGTT TAGCGAAGTT
  M
  ATACTTTGAA GTACTATACA GGATTAAAAA GAACCCAGAG AGGGGGCTGG TGAGATGGCT
  CAGTGGGTAA GAGCACCCGA CTGCTCTTCC AGAGGTCCGG AGTTCAAATC CCAGCAACCA
  CATGGTGGCT CACAACCATC CGTAACGAGA TCTGACTCCC TCTTCTGGAG TGTCTGAAGA
  CAGCTACAGT GTACTTACAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47780821	NES12001999	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33301736					SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47780821	NES12001999	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110566943 () rs orientation: forward

Symbol	Name	Function Class
Gm35775	predicted gene, 35775	650 bp downstream
Pth1r	parathyroid hormone 1 receptor	within coordinates