rs33302485 SNP Detail

Summary

• ID
  rs33302485
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:75699178 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAATC ACCAGGGGTG TCCTTGGAAC
  M
  TTAAAAGTGG CAAGACAGAA AGAAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39519477	mCV23506435	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss145963251	ENSMUSSNP155760	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss325451895	CHEV_17_75791523	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33302485					SNP	C	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:75699178 () rs orientation: forward

Symbol	Name	Function Class
Ltbp1	latent transforming growth factor beta binding protein 1	within coordinates
Rr392951	regulatory region 392951	1146 bp upstream
Rr531033	regulatory region 531033	within coordinates
Tssr145877	transcription start site region 145877	1219 bp downstream