rs33305663 SNP Detail

Summary

• ID
  rs33305663
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110765185 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGCCCTCT ATAAGTCTGA
  TCCATATTCG ATTACCTTTG GATAAGCAGC CCCTGCCTGG TGACTGAGCT AGACACAGCT
  AGTAAGCTGT CTGGATTACG CTAGCCTGTC TTCTGGAGTC TTCCAGGTCA TTCCCTGAAG
  AAAACTGAGA ACAGGAAAGA TTCTTTGGCA GTACTTTTGG GAAGATTATT TTGGGCCAGA
  R
  ACTTTGAGGT CTTTCCAGAC ATTCCAAATG GAGCCTCTGA GGCCAGTCGT GTTAGCTCAA
  GCGTGTCTAT GGGATCCCAG GGACACAGCT TGCCCATAAG GAGCCCTGTG GCCAGCCTGA
  CGCTGACTTT TTAGAGAAGG AGGTGGAGCA GAGGGACAGT GAGGTTGGAG CCTTTAAGTC
  CGGTAACGTG TTGACAGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss47781583	NES11996357	PERLEGEN	MM_PANEL2	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs33305663					SNP	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47781583	NES11996357	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110765185 () rs orientation: forward

Symbol	Name	Function Class
Rr192786	regulatory region 192786	1416 bp proximal
Rr202609	regulatory region 202609	within coordinates
Rr202610	regulatory region 202610	1481 bp proximal
Rr207412	regulatory region 207412	1186 bp distal
Rr207413	regulatory region 207413	1616 bp proximal