rs33306447 SNP Detail

Summary

• ID
  rs33306447
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3647312 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCCCTAG TCGGGCATGC
  CCTAAACTAG GCACGGTGGT GCATGCCTGT AATCTTAGGC CTCTGGAGGT TAAAGTGGGA
  GGATCCGAAA TTCAAGGTCA TTCTTAGCTA CCAGGCAGTT TTGAGGCTAC CTTGGGATAC
  ATGAAACTCA ACCTCTGAAA TCTAGCCAAA TAGATGCAGA GGAGATGAGA AACCTCAGTG
  S
  TACAGGGGCT CGCTGGGAAA GCTGGAGGGC TTGAGTTCAG AACCCCGGTA TCTAGGGAAA
  AGGAGAACTG GACAGACTGT AACCTAAGCT CTGGAGAGGT AGAGATGCAT GGATCCCAGG
  GGGCTCATGG ATCAGCTAGT TCAGCTGGAA TGGCAAAGCC AATGTTTAGG GAGAGATTCT
  GTCTCAAAAC CTCAGTGGAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46259835	mCV22853526	ABI	CRAMUS_MOUSE	f	SNP	C	G	G
ss148546638	ENSMUSSNP4995427	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33306447					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3647312 () rs orientation: forward

Symbol	Name	Function Class
Camsap3	calmodulin regulated spectrin-associated protein family, member 3	within coordinates
Rr180906	regulatory region 180906	1112 bp distal
Rr189485	regulatory region 189485	1089 bp proximal
Rr381636	regulatory region 381636	111 bp upstream
Tssr76064	transcription start site region 76064	788 bp downstream
Tssr76065	transcription start site region 76065	1003 bp upstream
Tssr76066	transcription start site region 76066	1027 bp upstream
Tssr76067	transcription start site region 76067	1042 bp upstream
Tssr76068	transcription start site region 76068	1059 bp upstream
Tssr76069	transcription start site region 76069	1131 bp upstream
Tssr76070	transcription start site region 76070	1281 bp upstream
Tssr76071	transcription start site region 76071	1330 bp upstream