rs33309349 SNP Detail

Summary

• ID
  rs33309349
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:88529641 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGAG GAGCATTCCA GACAGGGGAC
  Y
  ATACGTATCC TCTTGCCAAA ACACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46259873	mCV24221119	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C		T
ss50598757	NES14052500	PERLEGEN	MM_PANEL2	f	SNP			C		T	T	T	T		C	C	C	C		C
ss145451861	ENSMUSSNP2240200	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C			T
ss322761666	CHEV_8_90326912	CHEVERUD	SCREENING_POP	f	SNP									C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33309349					SNP	T	T	C	C	T	T	T	T	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50598757	NES14052500	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:88529641 () rs orientation: forward

Symbol	Name	Function Class
Tssr82324	transcription start site region 82324	1377 bp downstream
Tssr82325	transcription start site region 82325	1398 bp downstream
Zfp423	zinc finger protein 423	within coordinates