rs33311501 SNP Detail

Summary

• ID
  rs33311501
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:25517368 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGG ACCCTGGGGG CCTCAAGGGC
  R
  GACAGAGAGT GGAGTACAAC TGTTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss39520319	mCV24352317	ABI	CRAMUS_MOUSE	f	SNP	G	A		G
ss48355875	NES12244128	PERLEGEN	MM_PANEL2	f	SNP			G			A	A	A
ss145383654	ENSMUSSNP111175	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			G
ss325337062	CHEV_17_25435339	CHEVERUD	SCREENING_POP	f	SNP					G				A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs33311501					SNP	G	A	G	G	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48355875	NES12244128	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25517368 () rs orientation: forward

Symbol	Name	Function Class
Prss34	serine protease 34	within coordinates
Tssr143150	transcription start site region 143150	within coordinates