rs33313235 SNP Detail

Summary

• ID
  rs33313235
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:123653352 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGTC TGTGTGTTTC TGCCTTGCTG
  Y
  TCTGCCCTTG AGCTCCTCTT GACAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45763554	mCV24599443	ABI	CRAMUS_MOUSE	f	SNP		C	C					C		T
ss60834150	NES16018705	PERLEGEN	MM_PANEL2	f	SNP	C		C	T	C	C	T		C	T	C	C		C	T	C	C		C
ss149195376	ENSMUSSNP6560487	ENSEMBL	ENSEMBL_Sanger	f	SNP			C							T
ss321670975	CHEV_5_123965298	CHEVERUD	SCREENING_POP	f	SNP													C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33313235					SNP	C	C	C	T	C	C	T	C	C	T	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60834150	NES16018705	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:123653352 () rs orientation: forward

Symbol	Name	Function Class
Diablo	diablo, IAP-binding mitochondrial protein	within coordinates
Gm15751	predicted gene 15751	1278 bp downstream
Gm49027	predicted gene, 49027	within coordinates