rs33314686 SNP Detail

Summary

• ID
  rs33314686
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:25377224 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAT GTCTCAGGGG TGGGGGGTGG
  R
  GGTGTTATGT AGTTCACCTG AATAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss39521244	mCV22799058	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss145379344	ENSMUSSNP6823567	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss325336412	CHEV_17_25295195	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs33314686					SNP	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25377224 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Clcn7	chloride channel, voltage-sensitive 7			Intron
				Noncoding-Transcript-Variant
Tssr143140	transcription start site region 143140			1404 bp upstream