rs33315185 SNP Detail

Summary

• ID
  rs33315185
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152652083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATATACATA GAGAGTTCTA
  GGACAACCAG GGTAATATAT AGAACCCTGT CTGAAAAATA CATAAAATAA AATAAGTATG
  CACGGCTTCA CTATGCCACT CTGGCTGTTT TGAAACTTGT TATGTAGTCA AGGCTGGCCT
  GGAACTCAGG GAGATCTACC TACCTCTGCG TGTCATGCAT TGAGATATAG GTGAGTGCAC
  S
  TGGTCTACCT TTTTAGCTCT TAAAACAGTG AACATTGTGA GTTTTAGCCA TGACCCTGTA
  GACAGGTGGA AGACTCCCAT GCTCTAACTT CATTCTGGAG AGACTTGCAA AGCAGGAAGG
  GGCAATGATT TTCAGTTCCC GTAAGTCTAC AGCAACAGCT GATTCAGCTG GATGATGTCA
  CCTTCACAAA CCTCCTGACT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45263915	mCV27575705	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C	C
ss147974835	ENSMUSSNP4873741	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33315185					SNP	C	C	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152652083 () rs orientation: forward

Symbol	Name	Function Class
A630035D09Rik	RIKEN cDNA A630035D09 gene	within coordinates
Bcl2l1	BCL2-like 1	within coordinates
Rr374093	regulatory region 374093	within coordinates
Rr567478	regulatory region 567478	1422 bp distal
Rr567479	regulatory region 567479	within coordinates
Tssr20835	transcription start site region 20835	305 bp upstream