rs33318234 SNP Detail

Summary

• ID
  rs33318234
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:164326642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCA TCTCAGGAGG CGGCCTACCT
  W
  GGTTCCAGTT CCAGCCCTGT CACTG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45263715	mCV24934595	ABI	CRAMUS_MOUSE	f	SNP	A	T	A
ss148225418	ENSMUSSNP5270481	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss320606016	CHEV_2_164310222	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33318234					SNP	A	T	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164326642 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12662	CpG island 12662	1025 bp proximal
Dbndd2	dysbindin domain containing 2	Intron
Gm10725	predicted gene 10725	809 bp downstream
Gm20458	predicted gene 20458	Intron
Rr569631	regulatory region 569631	894 bp proximal
Tssr21598	transcription start site region 21598	1345 bp upstream
Tssr21599	transcription start site region 21599	1797 bp upstream