rs33318508 SNP Detail

Summary

• ID
  rs33318508
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:88198579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCACC CCCTCACCAA TCCATTCTGG
  R
  TGCTGCAAAA GAATGGGGAA CTCAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46260680	mCV24213079	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33318508					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:88198579 () rs orientation: forward

Symbol	Name	Function Class
Cbln1	cerebellin 1 precursor protein	within coordinates
Cbln1os	cerebellin 1 precursor protein opposite strand	861 bp upstream
Cpgi20771	CpG island 20771	683 bp distal
Cpgi20772	CpG island 20772	within coordinates
Rr666962	regulatory region 666962	425 bp proximal
Rr666963	regulatory region 666963	550 bp proximal
Rr666964	regulatory region 666964	1003 bp proximal
Rr666965	regulatory region 666965	1089 bp proximal
Rr666966	regulatory region 666966	1377 bp proximal
Tssr2634	transcription start site region 2634	575 bp downstream
Tssr78595	transcription start site region 78595	820 bp upstream
Tssr78596	transcription start site region 78596	832 bp upstream
Tssr78597	transcription start site region 78597	854 bp upstream
Tssr78598	transcription start site region 78598	887 bp upstream
Tssr78599	transcription start site region 78599	915 bp upstream
Tssr78600	transcription start site region 78600	938 bp upstream
Tssr78601	transcription start site region 78601	945 bp upstream
Tssr78602	transcription start site region 78602	1202 bp upstream
Tssr78603	transcription start site region 78603	1299 bp upstream
Tssr78604	transcription start site region 78604	1428 bp upstream
Tssr78605	transcription start site region 78605	1456 bp upstream
Tssr82309	transcription start site region 82309	1842 bp upstream
Tssr82310	transcription start site region 82310	1649 bp upstream
Tssr82311	transcription start site region 82311	1490 bp upstream
Tssr82312	transcription start site region 82312	1300 bp upstream
Tssr82313	transcription start site region 82313	1274 bp upstream
Tssr82314	transcription start site region 82314	170 bp downstream
Tssr82315	transcription start site region 82315	210 bp downstream
Tssr82316	transcription start site region 82316	249 bp downstream
Tssr82317	transcription start site region 82317	414 bp downstream
Tssr82318	transcription start site region 82318	592 bp downstream
Tssr82319	transcription start site region 82319	625 bp downstream
Tssr82320	transcription start site region 82320	652 bp downstream
Tssr82321	transcription start site region 82321	664 bp downstream