rs33319728 SNP Detail

Summary

• ID
  rs33319728
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:48388215 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCAAGAAC AGATTAGATA
  GGAACCATTA ATGAAACTGG GAATAAAAGG AGGATGGGTG GTACCCAGAG GTAATTCCTA
  GAAGAGAAAA ACCAGCCTAT CCAGTCTAAG AGCCTGGTAG GGGATGAAGA ATTAAGTTGC
  AGGCAGAACT GGAAAGCTGG GGAGTAGATA AGCACCAAAG CAGGCAGCTG CAAGTGGAGA
  Y
  GACTCAGGGA GGGTAGCTTC GGGGTCCAGG ACCAGCAGGG CAGATAAAGC CTTACTGTAG
  CTTAAGTAGA AGTTTCTGGT TGTGTCATGT GATGCAGACT CACATGGTGC CTTACTGAGG
  TAAGACCAGT GAGAGGACCC ATGATGTTTG GAGAGAGTAT AAATAGGACT CCATGGACAG
  TGAAAGGGTG CTTGTATAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45264699	mCV24995280	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss146519330	ENSMUSSNP2919978	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33319728					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:48388215 () rs orientation: forward

Symbol	Name	Function Class
Gm39809	predicted gene, 39809	within coordinates
Rr373140	regulatory region 373140	within coordinates