rs33320372 SNP Detail

Summary

• ID
  rs33320372
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:71052748 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGGA GCACGTCATG GTGCCAGCTC
  R
  GGTGAAGCCC ACTACCTGGC TGTGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46261460	mCV22785087	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss145127782	ENSMUSSNP814436	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss322700574	CHEV_8_73123997	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33320372					SNP	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:71052748 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20473	CpG island 20473	888 bp distal
Cpgi20474	CpG island 20474	1220 bp proximal
Rr186760	regulatory region 186760	347 bp distal
Rr186761	regulatory region 186761	252 bp proximal
Ssbp4	single stranded DNA binding protein 4	within coordinates
Tssr81632	transcription start site region 81632	1657 bp upstream
Tssr81633	transcription start site region 81633	656 bp upstream
Tssr81634	transcription start site region 81634	352 bp upstream
Tssr81635	transcription start site region 81635	1231 bp downstream