rs33324189 SNP Detail

Summary

• ID
  rs33324189
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:69578466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAGT TGTGAGCCAC CATGTGGTTG
  S
  TGGGATTTGA ACTCAGAACC TTCAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45264656	mCV25080773	ABI	CRAMUS_MOUSE	f	SNP	C	C	G
ss146730183	ENSMUSSNP6989408	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
ss320332156	CHEV_2_69586179	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33324189					SNP	C	C	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:69578466 () rs orientation: forward

Symbol	Name	Function Class
Ppig	peptidyl-prolyl isomerase G (cyclophilin G)	within coordinates
Tssr18139	transcription start site region 18139	828 bp upstream
Tssr18140	transcription start site region 18140	866 bp upstream
Tssr18141	transcription start site region 18141	881 bp upstream
Tssr18142	transcription start site region 18142	904 bp upstream
Tssr18143	transcription start site region 18143	936 bp upstream
Tssr18144	transcription start site region 18144	1140 bp upstream
Tssr18145	transcription start site region 18145	1256 bp upstream
Tssr18146	transcription start site region 18146	1357 bp upstream
Tssr18147	transcription start site region 18147	1406 bp upstream
Tssr18148	transcription start site region 18148	1445 bp upstream
Tssr18149	transcription start site region 18149	1469 bp upstream
Tssr18150	transcription start site region 18150	1515 bp upstream
Tssr18151	transcription start site region 18151	1530 bp upstream
Tssr18152	transcription start site region 18152	1606 bp upstream
Tssr18153	transcription start site region 18153	1691 bp upstream
Tssr18154	transcription start site region 18154	1795 bp upstream
Tssr18155	transcription start site region 18155	1816 bp upstream
Tssr18156	transcription start site region 18156	1858 bp upstream