rs33328115 SNP Detail

Summary

• ID
  rs33328115
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:88197092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACATG AGGCTCACCT AAGAAAGAAA
  R
  CGACCTATAT CAGAAGCGCC ATCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46262036	mCV24212783	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss145439784	ENSMUSSNP1400538	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33328115					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:88197092 () rs orientation: forward

Symbol	Name	Function Class
Cbln1	cerebellin 1 precursor protein	within coordinates
Cpgi20770	CpG island 20770	773 bp distal
Cpgi20771	CpG island 20771	within coordinates
Cpgi20772	CpG island 20772	1131 bp proximal
Rr382427	regulatory region 382427	1189 bp downstream
Rr666962	regulatory region 666962	1912 bp proximal
Tssr82308	transcription start site region 82308	542 bp upstream
Tssr82309	transcription start site region 82309	355 bp upstream
Tssr82310	transcription start site region 82310	162 bp upstream
Tssr82311	transcription start site region 82311	3 bp upstream
Tssr82312	transcription start site region 82312	175 bp downstream
Tssr82313	transcription start site region 82313	204 bp downstream
Tssr82314	transcription start site region 82314	1657 bp downstream
Tssr82315	transcription start site region 82315	1697 bp downstream
Tssr82316	transcription start site region 82316	1736 bp downstream
Tssr82317	transcription start site region 82317	1901 bp downstream