rs33328261 SNP Detail

Summary

• ID
  rs33328261
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:133576507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTACAACTGG CTCAAGCCAA
  GGGCTCAGAG GACAGTGACT TTTGCAATTC TTCCAACTTC ATAAATGATG GAGGAAGAGA
  CATGTTTTGG CAATGATATA ATGGACAATG GGAAGACTCT CCAAAGCCAC TTTTCATATC
  ATCACCTTGA TTTTAACTTC CTGAGATACT TCCTTTATAT TTGCTTTTAA ACATTAAATA
  Y
  GAGAAGAAAA AAAGAAAAGC TTATGGCAAC ATGTCCAAGG AGAATTGGGG AAAAGTTAAC
  ACATTCTTTC CTTTAAGTTG ACCTTCCAGA ATGGGGAGGA GAGTTTTCTG AGAACTTGTC
  AAGCAGTTTT CATTTTGGAT GTTGAATGCA TTTAGGAGAA AGATGTCATC AATTTATAAT
  ATGTTAATGG AATGGTAAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss47284789	NES11570355	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T		T	T		T
ss322453643	CHEV_7_141166461	CHEVERUD	SCREENING_POP	f	SNP											T			C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs33328261					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47284789	NES11570355	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:133576507 () rs orientation: forward

Symbol	Name	Function Class
5033415L01Rik	RIKEN cDNA 5033415L01 gene	1300 bp downstream
Adam12	ADAM metallopeptidase domain 12	within coordinates