rs33329531 SNP Detail

Summary

• ID
  rs33329531
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:133577159 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTACTTAGA GAGTTTAACT
  ACAAAGAAAC CCTGTGTTAT TGGTAGGTTC ACTTGCGATT ATATTGCACT AGATGCATCT
  TAAATGCTTC CTCAGATAGA AAAGCCCACT TTTAAATTCT CATCTCCAAT GTTTGTGAGA
  AGGCATGGAG GTAAAGCAAG TCCTAACTGG CTAAGTACTT TCTCTCATTT CTTTTTGAGA
  Y
  CAATTGTACA GAGGAGTTTC ACAGGTCCTT ACCTCTCTGT TGTCTGCCAC AATAACCAGC
  TCTACGTACT TGGTCATCTT AAGGGTCTCT CTCTTATGCT GTCAAAAGAA AGTGAGAGCT
  TAGTTTCCCT TAGTACTTCC CAGAGGCAAC TAGAGCACTG TTGCATGTCT TTTGAAAACA
  GAAACAAATA ACACAATAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47284804	NES11570363	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C		C	C	C	C		C
ss322453648	CHEV_7_141167113	CHEVERUD	SCREENING_POP	f	SNP											C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33329531					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47284804	NES11570363	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:133577159 () rs orientation: forward

Symbol	Name	Function Class
5033415L01Rik	RIKEN cDNA 5033415L01 gene	648 bp downstream
Adam12	ADAM metallopeptidase domain 12	within coordinates