rs33330402 SNP Detail

Summary

• ID
  rs33330402
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:133577744 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACCATGGT CATTTTTAAA
  CAAAATGAAC ATATAAACAT CTCCAAAGAA CATTCTAGAA CCAGGGCCAG CAAAGGCTTG
  CTGTTATAGA TTACACATGG GTGTGAAGCC CTCTGAAGGC TACACTGGAG CCCAGCCTGT
  CACTGGTGTT TCTTGAACTT TTATGGCCCA TTTTCATCTG CTCCATGCTG AGAGTAGAGG
  R
  GAACACACTT TGTAGAGAAA CTGTGGTCCC TCTGGGAAAT GTGTTTTTTT TTTTTCTTTT
  TTCTTTTTCT GGGGAAGGGA TGCTATTAGC CAGTCATTTA AGAACATAGT TTGCAGCAGT
  AGAAGATGCT GATGAACAGA GAGGCAAAGG GAGGTGCAGA GAGACAAGAT ACAAAGGAGC
  AGGCAGAGAC CAGGAAGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss47284816	NES11570370	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A		G	A	A		A
ss322453656	CHEV_7_141167698	CHEVERUD	SCREENING_POP	f	SNP											A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs33330402					SNP	A	A	A	A	A	A	G	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47284816	NES11570370	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:133577744 () rs orientation: forward

Symbol	Name	Function Class
5033415L01Rik	RIKEN cDNA 5033415L01 gene	63 bp downstream
Adam12	ADAM metallopeptidase domain 12	within coordinates