rs33331046 SNP Detail

Summary

• ID
  rs33331046
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:114581878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGCG GCTTACAACC TATCACCCCA
  S
  TTCCAGATTC CAAGGATTCC TATGC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss46262174	mCV23924430	ABI	CRAMUS_MOUSE	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs33331046					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:114581878 () rs orientation: forward

Symbol	Name	Function Class
D8Mit318	DNA Segment, Chr 8, Massachusetts Institute of Technology 318	1035 bp proximal
Rr174140	regulatory region 174140	1923 bp proximal
Rr179523	regulatory region 179523	878 bp distal
Rr179524	regulatory region 179524	within coordinates
Tssr82999	transcription start site region 82999	352 bp upstream
Tssr83000	transcription start site region 83000	322 bp upstream
Tssr83001	transcription start site region 83001	304 bp upstream
Tssr83002	transcription start site region 83002	291 bp upstream