rs33331292 SNP Detail

Summary

• ID
  rs33331292
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:84945982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGC ATGTGCAAGC CGTAGTACAG
  W
  GGAGACAGTT GGTAAGAGTA GAGCA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46263293	mCV24183538	ABI	CRAMUS_MOUSE	f	SNP		A	T				A	T
ss50592057	NES14063190	PERLEGEN	MM_PANEL2	f	SNP	A		T	A	A	T		T	T	A		A	A	T	A		A
ss145375467	ENSMUSSNP5844990	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T					T
ss322748211	CHEV_8_86743252	CHEVERUD	SCREENING_POP	f	SNP											T					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33331292					SNP	A	A	T	A	A	T	A	T	T	A	T	A	A	T	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50592057	NES14063190	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84945982 () rs orientation: forward

Symbol	Name	Function Class
D8Mit264	DNA segment, Chr 8, Massachusetts Institute of Technology 264	1039 bp proximal
Rr666460	regulatory region 666460	791 bp proximal
Zswim4	zinc finger SWIM-type containing 4	Intron