AGAGC ATGTGCAAGC CGTAGTACAG W GGAGACAGTT GGTAAGAGTA GAGCA W = A/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46263293 | mCV24183538 | ABI | CRAMUS_MOUSE | f | SNP | A | T | A | T | |||||||||||||
ss50592057 | NES14063190 | PERLEGEN | MM_PANEL2 | f | SNP | A | T | A | A | T | T | T | A | A | A | T | A | A | ||||
ss145375467 | ENSMUSSNP5844990 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | T | T | ||||||||||||||
ss322748211 | CHEV_8_86743252 | CHEVERUD | SCREENING_POP | f | SNP | T | A | |||||||||||||||
SNP Consensus Information | ||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
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rs33331292 | SNP | A | A | T | A | A | T | A | T | T | A | T | A | A | T | A | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss50592057 | NES14063190 | PERLEGEN | MM_PANEL | f | SNP | A/T |
Location: Chr8:84945982 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
D8Mit264 | DNA segment, Chr 8, Massachusetts Institute of Technology 264 | 1039 bp proximal | ||||||
Rr666460 | regulatory region 666460 | 791 bp proximal | ||||||
Zswim4 | zinc finger SWIM-type containing 4 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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