rs33331336 SNP Detail

Summary

• ID
  rs33331336
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100094695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGTGCGCT TAACCAAGTC
  TTTGGAGTAT ATCTTCAGGA ATGATATAGT TGAGTCAAGT GGTAACTCAA TTTGTAGTTT
  TTCTGAGGAA CTTTCATAGC GATTTCTATA CCAGCATTAT GTAATGGTTC AGCATTTGCC
  TTCCTTAATG TTCCCCTTCA GGATGCTAGG GTATGGGTAA ACACCAGCCA GCAAAGACAT
  R
  GGCCTTGTAT TGGGGATTTG CAGGTGGACA TAGCAACATG CTCAGCTGAG TGGAGTTTGG
  AGACTCATGA TCTGTTGAAG CAATAGTTGA GTATATTACC ACCTTAAATT TTCAAGTTTT
  GAGCAGTTTT AACAGTTCCT CTAAAAGTCA CAGTTAACAT TAAATAGTAA GCTAAGAATA
  CTATAGCCAT GTTATTTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46800663	NES10745538	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33331336					SNP	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46800663	NES10745538	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100094695 () rs orientation: forward

Symbol	Name	Function Class
Gdap2	ganglioside-induced differentiation-associated-protein 2	within coordinates
Rr64421	regulatory region 64421	1906 bp proximal