rs33332132 SNP Detail

Summary

• ID
  rs33332132
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100096562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGTGAGTG ATGCAGTGAG
  TGATTGCAGT GAGTGATTGC AGTGAGTGAT TGCAGTGAGT GATTGCAGTG AGTGCACTGA
  CCTTTGAGCG TTGACTTCGC CCCGCCCCAT TCATTTCTAT GAGCATCTTC TCTCCTTCAG
  TCCTACCCAT TCTCCAGGTT TCAGATGAAA GCAAATGTCT CTCAAGCCTT ACCTGTTGGG
  W
  CCAGAATGCC TGCCTCTGCT GCTTTCCTTT TTCACAGCGT GGCACAGCGT ACCATTCTGT
  CGATAGGGCA CTTCCATGGT ACCAGTCTCT AGTCATTGAA TGGGAGTTGG ACCAGACATC
  TCAGCAGTCC CTTACAAACA TAGAAGTTTT ATTTCCTTGA GTGTTTCCTA TGACATATTT
  CCATCATCTT CACCTCTGTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46800681	NES10745458	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	A	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33332132					SNP	T	T	T	T	T	T	A	A	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46800681	NES10745458	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100096562 () rs orientation: forward

Symbol	Name	Function Class
Gdap2	ganglioside-induced differentiation-associated-protein 2	within coordinates
Rr64421	regulatory region 64421	39 bp proximal
Rr69692	regulatory region 69692	639 bp proximal
Rr82369	regulatory region 82369	214 bp proximal