rs33333557 SNP Detail

Summary

• ID
  rs33333557
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:49013393 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCTAAATAT GATCAAGCCT TTTATTATTG AGGTAGGGAA
  TAGAAAAACA CAATTTCTTT TAGTGGGTTC CAGTGTGTGT GTGTGTGTGT GTGTGTGTGT
  R
  TACATGTGTA TGCACAAGTA CATGTGTGTA GATGCATGTA CACATATAAT GAGATCAGAG
  GTTGATATTG AGTGTCTTCC ACATACTATC TACCTTATA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
ss39523623	mCV23308579	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss325410152	CHEV_17_48845690	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
rs33333557					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:49013393 () rs orientation: forward

Symbol	Name	Function Class
D17Dcr13	DNA Segment, Chr 17, Derry C. Roopenian 13	within coordinates
D17Mit178	DNA segment, Chr 17, Massachusetts Institute of Technology 178	within coordinates
Rr392702	regulatory region 392702	589 bp upstream