rs33336233 SNP Detail

Summary

• ID
  rs33336233
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153363037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTTGAAGAT TGGGAATGGC TCTGGGGCCT CTGGGGCCCT
  GAAGTGCAGG ACTGGACAGA CAGTTCTCAG AACCCTACTC AGAGGGAAGC ATAAATAACC
  Y
  TTCCTTGCAG GGAAACGCCC TCCCTCAGGA GCAGGGGCTA TTCCAGGCCA TTAGGATGCA
  AAGTAAACCA AATACACAGA GCCCTGCTAA AGCTGTCAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45266158	mCV22914006	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss147995332	ENSMUSSNP5025350	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs33336233					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153363037 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nol4l	nucleolar protein 4-like			Intron
				Noncoding-Transcript-Variant
Rr567668	regulatory region 567668			508 bp distal
Rr567669	regulatory region 567669			1067 bp proximal