rs33337168 SNP Detail

Summary

• ID
  rs33337168
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:154300021 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGGGATTAC TCCTTGCTTC CTTCTTTCTT CCTTCTCTCT
  CTCCTGAATT GTTTTGCTAG GATCAGTAAA TATTTGTGGG CATCACTGTG TTGCCCATTC
  W
  GAGTTTGAAC TCATAGGTTA ACAAAGTGTT CCTGCTACAG TCTCCCAAGT AGCTGGGAAT
  AAAGGTGTGT GCCCCTGTGT CACACTTGAG AAGCGTCTT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45265963	mCV22917411	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
ss148030993	ENSMUSSNP4969139	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33337168					SNP	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:154300021 () rs orientation: forward

Symbol	Name	Function Class
Cbfa2t2	CBFA2/RUNX1 translocation partner 2	Intron
Rr567834	regulatory region 567834	1928 bp distal
Rr567835	regulatory region 567835	1567 bp proximal