rs33337606 SNP Detail

Summary

• ID
  rs33337606
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:66369996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCCT ATTCCTGTTT CACCATCACC
  Y
  TCTTTCTAGT TTCTCCTTTT TTAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45766589	mCV22883473	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss321563109	CHEV_5_66603892	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33337606					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:66369996 () rs orientation: forward

Symbol	Name	Function Class
Gm73278	predicted gene, 73278	1973 bp upstream
Gm73415	predicted gene, 73415	1555 bp downstream
Rr378070	regulatory region 378070	1210 bp upstream
Tssr51198	transcription start site region 51198	1891 bp downstream