rs33343195 SNP Detail

Summary

• ID
  rs33343195
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:129979275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTGAGCTGCT TTTATCAGAG AAATAACAAA ACATCAGATT CAAAGAGAAA CATCCAGGAG
  CTTCAAATTA GGGGGACAAA AGCATAGCTT CTTTATAAAA AGGCTCCAAG TAAGTATATC
  TATTACACAA TATAGAAAGC AGAATATAAT GGGACACCTA AGGGAAGAAT AACAGCTAAC
  CTGAATATAT TCGTTGTTAG GAAATGTTTC GCTTGCCTTT TTACCTTCTG TCTCTTTCTA
  CTCTCTACTT TATTTTAGTA ATATTTTTAT TTTACCTTAC CCAGCAGAAT TTTGTCCAGT
  W
  TTTATTATTT TTTTAAAAAT ATACTCACAT TTGGGTGCTG GAGAAATGAC CAAAAAGTTA
  AGAATAGTTG CTGATCTTTC AGAGGGCCTG TGTTCTGTTC TCAGCACCCA AATTAAGAAG
  CTCAATGTGG GGGTGACCTC TTACTGCGTT CTCACGGCTC TTTCTGTTTG TGAGACCTGT
  GGCTCGACCC TGCTGATAGC AAGATGTCTT CAGGAAATGC AAAAATTGGG TATCCTGCTC
  CCAACTTCAT AGCTACAGCT GTTATGCCAG ATGGACAATT CAAAGATATC AGCCTACGTG
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46264258	mCV24003252	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33343195					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:129979275 () rs orientation: forward

Symbol	Name	Function Class
Gm21399	predicted gene, 21399	204 bp upstream
Gm64945	predicted gene, 64945	within coordinates
Tssr2751	transcription start site region 2751	125 bp upstream
Tssr2752	transcription start site region 2752	156 bp upstream
Tssr2753	transcription start site region 2753	427 bp upstream