rs33346431 SNP Detail

Summary

• ID
  rs33346431
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84415305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTCTGCCTG TACACAGTTT CAGGGATTGA ACGAAGATTA
  TCAGCCTCAC TAGGCTTCAG AATAATTCTC TAAAGAAAAT TGGTACCACT GTACTTGTGG
  R
  AAAATACCTA GAGTTTAAAT GTTCTCAGCG CTGCTTTGGG GGGTCGGGAG GAGGGAAGCT
  GACAGCAGTA GTGGCGCACG CCTTTAATCC CAGCACTCG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39524316	mCV24480940	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss146130476	ENSMUSSNP600335	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33346431					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84415305 () rs orientation: forward

Symbol	Name	Function Class
Tssr146028	transcription start site region 146028	305 bp upstream
Tssr149629	transcription start site region 149629	1451 bp upstream