rs33346651 SNP Detail

Summary

• ID
  rs33346651
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:71147814 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTA AAGCCTTGTG AGAGGTTAGG
  W
  TAGGCCAAAG CAACAAAATA AAAGA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss46265095	mCV22788428	ABI	CRAMUS_MOUSE	f	SNP	T	A
ss145129709	ENSMUSSNP3430845	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
ss322701092	CHEV_8_73219063	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs33346651					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:71147814 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20485	CpG island 20485	258 bp proximal
Cpgi20486	CpG island 20486	1375 bp proximal
Gm64347	predicted gene, 64347	within coordinates
Rr368548	regulatory region 368548	378 bp upstream
Rr400910	regulatory region 400910	115 bp upstream
Rr664887	regulatory region 664887	1080 bp distal
Rr664888	regulatory region 664888	within coordinates