rs33347740 SNP Detail

Summary

• ID
  rs33347740
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24908159 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTC CAGGAAGCCC TCCCAGATGA
  K
  CCCCTTCTAG CTACAGCAGC AGGGA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39524870	mCV24347433	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss145361356	ENSMUSSNP5143633	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss325333036	CHEV_17_24826130	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33347740					SNP	T	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24908159 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8737	CpG island 8737	1314 bp distal
Cpgi8738	CpG island 8738	320 bp proximal
Rr339325	regulatory region 339325	within coordinates
Syngr3	synaptogyrin 3	within coordinates
Tssr146762	transcription start site region 146762	695 bp downstream
Tssr146763	transcription start site region 146763	716 bp downstream