rs33348272 SNP Detail

Summary

• ID
  rs33348272
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7189855 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGTTTATG AGCAGCAAAC
  ACTGGACTCA ATTGTTTATT GCTTTAAAAA GGAAAAAGGA CACAAAGTTG AGGGGAGGTA
  GGGAGATGGA GTGGAGAAGG AAGGGAGTAG AGAAAGGAGT AGGGGGAGGT GCATACAATC
  AAAACAAATT ATATGAAATG TTGAAAGAGT TGACAACCAT TTGTTAAAAG TCAATTATAC
  R
  TAAGTGATAT GATGAAATCG TCTACATAAT GAAAAAGCAC TCATGTCACA AAAGCACATC
  ACTGTGCTCT CTGAACCATC ATGGCTACAA GCACTTCTTT CACCTTCAAA TTAACACTGC
  AAGTAAAGGC CCAAAGAGAT AGCTGTGTGG CCATGAAAGG GAAAGCCTGA ATGCTTCTGG
  TATTGTTTGT ATTTATCATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46801810	NES11002902	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33348272					SNP	G	G	G	G	G	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46801810	NES11002902	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7189855 () rs orientation: forward

Symbol	Name	Function Class
DXImx31	DNA segment, Chr X, Immunex 31	1544 bp distal
Rr4531	regulatory region 4531	855 bp distal
Rr4534	regulatory region 4534	1746 bp proximal
Rr9978	regulatory region 9978	779 bp distal
Rr10750	regulatory region 10750	1845 bp proximal