rs33348335 SNP Detail

Summary

• ID
  rs33348335
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:91860010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCGACAGTG AGTATACCGC AGAGGGCCAA TGAGACCTAG
  CTACCATCGT TCTTCTGTGA CACAGAGCTA ACTAATGTTA TCACCCCAAA AAGGGTTTAC
  R
  AAATTCCACA TTAAGAGGCC ACCAGACAGG ACCGAGGAAA AGTAAACAGC CCGGGCCTCC
  GACAGCCCGG CTGGCTGGGC AGCTAGCTGG GCCGGGCAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss46264952	mCV23191268	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss322789574	CHEV_8_93657281	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs33348335					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:91860010 () rs orientation: forward

Symbol	Name	Function Class
Aktip	AKT interacting protein	within coordinates
Cpgi20808	CpG island 20808	36 bp proximal
Rr368579	regulatory region 368579	700 bp upstream
Rr667489	regulatory region 667489	within coordinates
Rr667490	regulatory region 667490	605 bp proximal
Rr667491	regulatory region 667491	1890 bp proximal
Tssr82405	transcription start site region 82405	567 bp downstream
Tssr82406	transcription start site region 82406	645 bp downstream