rs33349134 SNP Detail

Summary

• ID
  rs33349134
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:128845987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCTTGAAG CTGAACAAAT
  AAAGAGTAAC TGTTTCTATC ACTGTGATGA GCAAAAAGTA ATTTTTTTCC ATCACTGGGA
  CGAGTCTTGT AGTCACTGTC CAAAGACAAT GAACTGTGAC CTCATACAAA CTCATAGACC
  AAAATGGTTC TCAAAACGCA AAGCTAAAGA GTAGACTGTG AGCTGGGCAG TGGTGGCACA
  Y
  GCCTTTAATC CCAGCACTTG GGAGGCAGAG GCAAGTGGAT TTCTGAGTTC AAGGCCAGCC
  TGGTCTACAG GGTGAGTTCC AGGACAGGAC AGCCATATCT ACACAGAGAA ACCCCATCTC
  AAAACAAAAC AAAACAAAAA AACAAAAAAC AAAAAAAGAA AGAGAGAGAG AGAGAGAGAA
  GCAAAGCAAA GCAAAGCAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45767620	mCV23139695	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss321688099	CHEV_5_129274798	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33349134					SNP	C	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:128845987 () rs orientation: forward

Symbol	Name	Function Class
Gm42875	predicted gene 42875	1110 bp upstream
Rimbp2	RIMS binding protein 2	within coordinates