rs33350454 SNP Detail

Summary

• ID
  rs33350454
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32906264 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGGGTAGT CAAGGTAGGA
  ACTCCAGCAG GAACTTGAGA CAGAAAGCGT GGAGAAACAC TGCCCATTTG CTCACTCTCA
  AGCACATGTT TAGCTAGCTT TTGAAAAATA CAGTCCAGAA CTATCTGTGC AGAAAATGGT
  GACAGGTAGA ATGGCTGGGT GCTTCTAAAT CAACTAACAA TTAAGACAGT CCCCCAAAGA
  Y
  GTGCCCACAG ACCACTCTGA TCTGGCAGTA CCATGCAACT GAGACTCCCT TCTCAGGTGA
  GTAGAGGCCC TGTCAAGTTG TCAATTACAA CTAACAGGCT TCAATGTTGC CTAGACACCC
  CTAAGTCCCG GTTGAGACCT TCCCTGATGA TGGTCCCTGG GGCTGAAATT AATACCACCA
  GAGAACATTC ATCTTCGCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39525620	mCV24378315	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	T
ss145473640	ENSMUSSNP1745039	ENSEMBL	ENSEMBL_Sanger	f	SNP			C		T
ss325362855	CHEV_17_32824235	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33350454					SNP	T	T	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32906264 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	within coordinates
Rr337381	regulatory region 337381	1251 bp proximal
Rr339615	regulatory region 339615	63 bp distal
Rr341335	regulatory region 341335	337 bp proximal
Tssr143733	transcription start site region 143733	1694 bp downstream
Tssr143734	transcription start site region 143734	1675 bp downstream
Tssr143735	transcription start site region 143735	1647 bp downstream
Tssr143736	transcription start site region 143736	1613 bp downstream
Tssr143737	transcription start site region 143737	1184 bp downstream