rs33352519 SNP Detail

Summary

• ID
  rs33352519
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:24304022 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT GTGTGTGTGT GTGTGTGTGT
  R
  TATGTGTGTG TGTATGTGTG TACAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45768142	mCV23237174	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs33352519					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:24304022 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15589	CpG island 15589	1341 bp proximal
Gm71592	predicted gene, 71592	318 bp downstream
Klhl7	kelch-like 7	1581 bp upstream
Rr398996	regulatory region 398996	1407 bp upstream
Tssr45399	transcription start site region 45399	1554 bp upstream
Tssr45400	transcription start site region 45400	1671 bp upstream
Tssr50303	transcription start site region 50303	1443 bp downstream