rs33361814 SNP Detail

Summary

• ID
  rs33361814
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12502305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTCATGAA GGCCCTGCTG
  GCTCCCTGAC AGGCTGCTCC CCACCTCTGC ACTCCAGCCC CACAAAGACC TGGGACAAGG
  AGGTCTCAAA CACCCAGCTT AACCTTGAGT GACTGGACAT AGAGCACGAG GCCTTGATGC
  GGCCAGGAAC GTTCCCACTC ACTCACCTTT CTGTTTCCTT TCCAGTTGCC CCAATAGTAA
  R
  CCATCCTCTT GCCCTTGGGC ATACAGTCCC GCAGTTTGTT ACTGTGCGGA GCTAGACCCT
  GAGGTCTCCA GATGGGATCA GAGGGCTTTC AACACCCCAG CCGGGCCACT GATCGGTGAT
  GGTCTTCCTT GCCCTCCGTT TCCTTCTTCT TCCTTGCCCT CCTTGTCCTG TGCCAGTCTC
  TCGCCTTCAT CTATGCCTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss46266905	mCV22520315	ABI	CRAMUS_MOUSE	f	SNP		A	G					G		G
ss60571603	NES16043275	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G	G		G	G	G	G		A	G	A		G
ss148678592	ENSMUSSNP4121912	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G							G
ss322498722	CHEV_8_12452305	CHEVERUD	SCREENING_POP	f	SNP													G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs33361814					SNP	A	A	G	G	G	G	G	G	G	G	G	G	G	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60571603	NES16043275	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12502305 () rs orientation: forward

Symbol	Name	Function Class
Gm56835	predicted gene, 56835	within coordinates
Rr381713	regulatory region 381713	1626 bp upstream