rs33362108 SNP Detail

Summary

• ID
  rs33362108
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:43670768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAATGTAAA CATCTGATAT
  ACAGGACATA TATAGACACC TGTGAAAAAG TTGTTTGACT CCCAAAGGAT TCAAAACCTA
  GGCAGAGGCT GAGAACCACT AATGTAGAGG ATCCTGCTTG CAGCAATCTA TGGATCATAG
  ATCATCAATA ATTCTGCAAG CCTTGGAACA AAATTGATTA ATAAATATAG GAGATTTTTT
  Y
  CCCCAAGATT AATAACCAAT ATCACGAACC TTTCCAAAAA CAGCAGCAGT TTGGGTCTCT
  GCCTGATGGC AGGCAACTAC TCTTTCTGAG CCTGTTCTGA CCTGTTTTTC ACTGGCTGCT
  CTGTTGCCTG ATGTCTGGGC CAGGGCCAGA AGTAAGGGGA AGAGGACGAA GGCACCCTTG
  ACTTTTGCAG AGTTAAACAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39526577	mCV25275189	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss145668091	ENSMUSSNP1045307	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss325395367	CHEV_17_43496826	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33362108					SNP	C	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:43670768 () rs orientation: forward

Symbol	Name	Function Class
Adgrf5	adhesion G protein-coupled receptor F5	574 bp upstream
Rr527086	regulatory region 527086	84 bp proximal
Rr527087	regulatory region 527087	585 bp proximal
Tssr144671	transcription start site region 144671	143 bp upstream
Tssr144672	transcription start site region 144672	445 bp upstream
Tssr144673	transcription start site region 144673	486 bp upstream
Tssr144674	transcription start site region 144674	509 bp upstream
Tssr144675	transcription start site region 144675	546 bp upstream
Tssr148115	transcription start site region 148115	1474 bp downstream