rs33362795 SNP Detail

Summary

• ID
  rs33362795
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7663262 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTCTGCA TCACTCTGGG
  TTCCTTTATA ATCCCCTCCC TACTCCTCTC AGGCCCCAAT GGTACTTACC GGAAGGCCTG
  ATGCTAGAGC CTGCCTGCCA AGATATTTCA TCAGCTCAGT TGTTCCATTG ACAGATAAAG
  GGACCTGCTT TATATCCTGT GTTCTGGGAT AAAGTTGTGA GCTGCACAGA ATGGTCCTAA
  Y
  TCTTGGGTAA CTTACTGTTA GTTTACTTTC TTTTTTTTTT TTTTTTTTTT TAAGATTTAT
  TTATTTATTT ATTAGTAAGT ATACTGTAGC TATCTTCAGA CACTCCAGAA GAGGGCATCA
  GATCTTGTTA CAGATGGTTG TGAGCCACCA TGTGGTTGCT GGGATTTGAA CTCTGGACCT
  TTGGAAGAGC AGTCGGGTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46805323	NES10987148	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33362795					SNP	T	T	T	T	T	T	C	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46805323	NES10987148	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7663262 () rs orientation: forward

Symbol	Name	Function Class
Gripap1	GRIP1 associated protein 1	within coordinates
Rr4742	regulatory region 4742	339 bp proximal
Rr7807	regulatory region 7807	1635 bp distal
Rr10055	regulatory region 10055	139 bp proximal