rs33362798 SNP Detail

Summary

• ID
  rs33362798
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7664907 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAGAGAGC AATGGTGGTG
  TACTTACATG CATAAAATAA ATAAATAAAT CTTTAAAAAC ATATAAACCA CATCAATAAA
  TAAATAAAAT TTAATTGTGA TTGATATCCG GTCAGAAAGG AGTGAACAGA GAATGCTGTG
  GTAAAATACT GGATTTGTGT GTGTGTGTGT TGGCTAATCC TAGGTTAAAG ATGACATAGC
  R
  GTGAAGAATG CATAGAAGCC AGTCAGGTGA AAAAAATGGG TGAAAGAAAT GATGTTTTAT
  CCGAGGCAAT ATTTTTTCCT TGTGGGCCTT AGTGAGCTTC AGTTTTAAGC AGGAGATTGG
  ATTGCATGCC TGCTGTATTT CATTTTCATA GTGTGCCCCT TCAAAGCTAA AGACTATAAG
  ACCTGTAAGA TACAGTTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46805326	NES10987024	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33362798					SNP	G	G	G	G	G	G	A	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46805326	NES10987024	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7664907 () rs orientation: forward

Symbol	Name	Function Class
Gripap1	GRIP1 associated protein 1	within coordinates
Rr4742	regulatory region 4742	907 bp distal
Rr10055	regulatory region 10055	1000 bp distal
Tssr160443	transcription start site region 160443	1801 bp upstream